PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi08g03740.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family AP2
Protein Properties Length: 284aa    MW: 31584.3 Da    PI: 7.946
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi08g03740.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2224.1e-07153173121
              AP2   1 sgykGVrwdkkrgrWvAeIrd 21 
                      s+y+GV++++++grW+++I+ 
  Vradi08g03740.1 153 SQYRGVTFYRRTGRWESHIWY 173
                      78****************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MAMFDLNVDI NHADADSGSS CAQKEVKLQS FPTDISDSRT SNSSVWNPAD EDSSNNSSPL  60
IFDILNKERG GSEFNMEQNM AQKGEMATRT FFPVTSSDKG GRVPDFKSGL WGSTQLLNQS  120
FPESDEKQNE LRTLQQKLPH VRKNRRGPRS RSSQYRGVTF YRRTGRWESH IWYGTCHDLD  180
LSLGISTSSK KLKNCDYGGD YSFGCMPCKI PQEIGTMCEE KSMVERMRSV HLQKFCSNGS  240
IGSRPLQSNA ASSGFVTYQL CQHNSSLTLQ GCGVTLVDQI KPL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014514818.11e-122PREDICTED: AP2-like ethylene-responsive transcription factor TOE3
TrEMBLA0A0L9TV341e-114A0A0L9TV34_PHAAN; Uncharacterized protein
STRINGGLYMA10G22390.23e-82(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15652911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60120.21e-18target of early activation tagged (EAT) 2